to clarify, the only reason, why a anti virus app  may flag our software more is because, some of our software needs, more intimate access to the system then other apps out there. its merely doing what its designed to do, and sometimes gets over zelliss, the issue comes in ware the devs of the software cannot be bothered to actually test the false positives we submit, so hence we not seeing any improvement in it as time goes by, they'll only cater for main stream software or, apps that will impact allot of  users, and that is ware they'll reconsider false positives.
although, i've never seen MSE act that way with the app mentioned in this post. then again, each system is unique, with unique settings and other apps we do not know of. here's a good old example.
i have a app that can, retreave forgotten passwords. guess what? its flagged as a hacking tool. now, its not intended to hack, but to help. but, its actual nature is to find things in places no average smokie joe will go in to. so the antivirus rightfully flags it as bad. yet its what you intend to do with it, or what it intends to do, in conjunction with what its being used with, that matters.
now, it has to let me know about this so called, bad app, because,  had I not willingly launched it, and, had, another app, launched this particular app that was wrapped in a known trusted app, it effectavely would be tricking me to think its safe. when it is not.
so yep. sometimes, we got to think further, then just 1 instance of weather something is a false posetive or not.
as for code factory? sadly I don't have that app. and cannot buy it, so there fore, cannot test/comment more thurrowly about it. as nice as it would have been to have.
although I do believe my postulations and educated guesses  would be right on the money.